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Table 7 Occurrence of transposons and protein homology in cis-NATs

From: The distribution and evolution of Arabidopsis thaliana cis natural antisense transcripts

Data set

Amount of NOLP genomic DNA containing transposons for significantly conserved NOLPs versus total NOLPs*

Amount of NOLP genomic DNA containing protein homology for significantly conserved NOLPs versus total NOLPs**

TAIR

0 (0%) (4479, 5%)

7 (0%) (2701, 3%)

Matsui2008

63323 (12%) (432754, 26%)

13855 (3%) (42349, 3%)

Okamoto2010

18433 (10%) (154126, 26%)

1406 (1%) (4256, 1%)

  1. *Transposon details taken from TAIR10 annotations.
  2. **Protein homology to Arabidopsis annotated proteins (BLASTP [21] e-value ≤0.0001).