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Fig. 2 | BMC Genomics

Fig. 2

From: Reference genome of wild goat (capra aegagrus) and sequencing of goat breeds provide insight into genic basis of goat domestication

Fig. 2

Photos of wild goat and re-sequenced domestic goat breeds with CNV ratio curve around the ASIP gene region. The CNV ratios (CNV ratio = Read Depth/One average fold depth in whole genome, e.g. CNV ratios fluctuating around two means the read depth of the region is two-fold of the mean in whole genome) calculated within 200-bp sliding windows with 100-bp slide steps were shown as scatter plot and fitted with moving average trend line. Around ASIP (wild goat scaffold1142:1,447,546-1,449,086 bp) region, Bamu wild goat, Khonj wild goat, Yunnan black goat and two Rangeland goats were detected as having one copy while two Boer goats and a Cashmere goat were detected as having at least two copies. Panel 1: wild goat (tan) (Photo is provided by Ghasem Hosseini Salekdeh.); (a) Bamu wild goat; (b) Khonj wild goat. Panel 2: Yunnan Black goat (black); Panel 3–4: Rangeland goats (dark brown and black); Panel 5–6: Boer goats (banded and Schwartzal); Panel 7: Cashmere goat (white) (Photos of Panel 3–7 are provided by James Kijas)

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