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Fig. 4 | BMC Genomics

Fig. 4

From: Genome-wide transcriptomic analysis of a superior biomass-degrading strain of A. fumigatus revealed active lignocellulose-degrading genes

Fig. 4

CAZyme gene clusters and co-regulated fragments. a CAZyme gene clusters: cluster 25 contained a beta-1,3-endoglucanase gene (eglC) and an acetyl xylan esterase gene (axe1), as well as 2 endo-1,4-beta-xylanase genes (xyn1 and xyn2). Y699_7610 encodes an extracellular phytase. In CAZyme gene cluster 40, beta-glucosidase and endoglucanase are co-induced. b Co-regulated fragments: fragment 6 is up-regulated. It includes the CAZyme gene cluster 6 (from Y699_04554 to Y699_04576), in which Y699_04562 encoded a beta-glucosidase, Y699_04563 encoded a MFS sugar transporter, Y699_04570 encoded a xylosidase/arabinosidase and Y699_04574 encoded a MFS alpha-glucoside transporter. Fragment 18 includes the secondary metabolite biosynthetic gene cluster 23 in which genes are down-regulated in all three treatments compared to sucrose. Y699_07834 encoded a polyketide synthase

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