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Table 5 Top 25 differentially expressed transcripts

From: RNA-Seq in Mytilus galloprovincialis: comparative transcriptomics and expression profiles among different tissues

FC

Hemocyte top 25 expressed

FC

Mantle top 25 expressed

1,820

Mytilin B

5,008

Usherin

750

Procollagen type VI alpha 4

2,702

Mitochondrial glycine cleavage system H prot

744

Metallothionein MT-20

2,521

BMSP / Protein PIF

709

C-type lectin

1,992

MAM dom-cont glycosylphosphatidylinositol anchor protein 2

685

Disintegrin and metalloproteinase with thrombospondin motifs 16 (ADAMTS16)

1,951

Protocatechuate 3,4-dioxygenase beta subunit

588

Cystatin-A-like

1,795

Collagen alpha-1, IV/III

530

Melatonin receptor-like (1A/1B)

1,758

Keratin, type II cytoskeletal 2 epidermal

508

Nacre protein

1,618

Fibroin heavy chain

478

Defensin 2b (MGD2b)

1,552

ATP-dependent RNA helicase A

465

C1q domain containing protein

1,541

Endo-1,4-mannanase

428

Mytilin-6

1,489

Heterogeneous nuclear ribonucleoprotein A3

407

Spermine oxidase

1,489

Mytimycin

383

Gly, Ala and Asn-rich protein

1,489

Splicing factor 3A subunit 2

357

Apextrin-like protein (apelP)

1,409

L-rhamnose-binding lectin CSL3

320

Mucin-2

1,389

Sarcoplasmic calcium-binding protein

296

Mytilin-7

1,314

Protein diaphanous

269

Macrophage mannose receptor 1-like

1,314

Vitellogenin 6

260

Serine protease inhibitor Cvs.i-2

1,261

Fibronectin 3

258

MAC/perforin- and kringle-dom-cont prot

1,218

Heat shock protein 70

252

Peptide O-xylosyltransferase

1,193

Whey acidic protein-like

251

MAM and LDL-receptor class A dom-cont prot

1,184

Porin-like

246

Heat shock protein 70

1,184

Hornerin / filaggrin

242

Myticin-A

1,168

Chitinase 3

241

Interferon alpha-inducible protein 27 2B (IFI27/ISG12)

1,144

Protein unc-93 homolog A

237

Inhibitor of apoptosis 7B/2/3

1,136

TPA: SCO-spondin protein

FC

Muscle top 25 expressed

FC

Gill top 25 expressed

2,702

Collagen alpha-3/6(VI) chain

3,083

Inner centromere protein A

1,226

Myosin heavy chain

2,837

BMSP / protein PIF

1,128

Heat shock protein 70

2,817

Perlucin

861

Collagen pro alpha-chain

2,592

Caveolin-1/3

787

C1q domain containing protein

2,120

Peptide O-xylosyltransferase

776

Tripartite motif-containing protein 2/56 (TRIM2/56)

2,048

Endonuclease domain-containing 1 protein

695

Proteoglycan 4

1,872

Insulin-like growth factor binding protein 2b

690

Protein LEA-1

1,833

Fibrinogen-related protein 7

662

Sushi, VWF type A, EGF and pentraxin dom-cont prot 1 (SVEP1)

1,771

Synaptotagmin

657

Beta-glucanase/Beta-glucan synthetase

1,734

Collagen alpha-1(X) chain-like

644

Enzymatic glycosylation-regulating-like

1,722

LDL receptor-related protein 8 (LRP8)

553

Fatty acid-binding protein homolog 9/7

1,652

Suppressor of tumorigenicity 14 protein (ST14)

530

Nucleolar protein 12

1,552

Antistasin

488

Forkhead box L2

1,479

Collagen triple helix repeat protein

481

Obscurin

1,458

LPS binding protein / Bactericidal permeability-increasing protein

471

Calmodulin

1,305

Viral A-type inclusion protein repeat

471

Dynein light chain 1

1,269

Big defensin

465

Angiopoietin-4

1,269

Notch gene homolog 3-like

465

GTP-binding protein REM 1

1,261

Alpha 1 type V collagen

461

Synaptopodin 2

1,243

Golgin subfamily A member 4

458

Myosin light chain

1,243

Apextrin-like protein

452

Calpain-5

1,235

Short-chain collagen C4

443

Plasminogen

1,209

Dermatopontin 2

440

Paramyosin

1,184

Stanniocalcin

428

BTB/POZ domain-containing protein KCTD7

1,160

Tolloid-like 1 precursor (TLL1)

  1. FC fold change