Table 6 Transcripts with RNA-binding motifs in the 3′ UTR (500 or 200 bp downstream of stop codon)
From: Transcriptional analysis of phloem-associated cells of potato
| Â | Pumilio (500Â bp) | Nova (500Â bp) | PTB (200Â bp) |
|---|---|---|---|
Group 1 | |||
 Transcripts in whole genome (39,028) | 4629 | 3042 | 31,742 |
 Transcripts with more than 10 reads in phloem-associated tissue (15,167) | 2142 | 1318 | 13,320 |
 Transcripts with more than 500 reads in phloem-associated tissue (3593) | 529 | 290 | 3223 |
Group 2 | |||
 PAC abundant & Differentially expressed genes under photoperiod change (2166) | 338 | 168 | 1943 |
Group 3 | |||
 TFs (sequence-specific DNA binding transcription factor activity) (1090) | 190 | 88 | 859 |
 TF transcripts with more than 10 reads in PAC (525) | 103 | 39 | 442 |
 TF transcripts abundant in PAC (163) | 28 | 6 | 130 |