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Table 2 T. castaneum assembly summary. Assembly metrics for Tcas5.0 (the starting sequence scaffolds), the Tcas5.0 in silico maps, the consensus genome map of assembled molecule maps, the automated output of Stitch (Tcas5.1), the manually curated sequence assembly (Tcas5.2) and the sequence assembly produced by the BioNano Hybrid Scaffold software for the T. castaneum genome

From: Tools and pipelines for BioNano data: molecule assembly pipeline and FASTA super scaffolding tool

 

N50 (Mb)

Number

Cumulative Length (Mb)

Tcas5.0 sequence scaffolds

1.16

2240

160.74

Tcas5.0 in silico maps

1.20

223

152.53

Consensus genome maps

1.35

216

200.47

Tcas5.1 sequence scaffolds

3.85

2148

165.72

Tcas5.2 sequence scaffolds

4.46

2150

165.92

Tcas BioNano hybrid scaffolds

1.83

2210

175.54