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Fig. 4 | BMC Genomics

Fig. 4

From: MicroRNA-mediated susceptible poplar gene expression regulation associated with the infection of virulent Melampsora larici-populina

Fig. 4

Scatter plot of rust infection-regulated gene expression. a Scatter plot of mRNA expression levels according the raw reads. Data points above (green) or below (red) the slope line represent down-regulated or up-regulated miRNAs. Differentially expressed genes are denoted with circles based on x 2` (P ≤ 0.01). b Scatter plot of gene expression in + rust and –rust libraries according the log2 of normalized reads. Expression levels are normalized to TPM. Differentially expressed genes are labeled red based on x 2 (P ≤ 0.01) (details in Table 2). 1, 2 and 3: WRKY DNA-binding protein 11; 4: Auxin response factor 16; 5: Glutaredoxin family protein; 6: PR5-like receptor kinase; 7: epsin N-terminal homology (ENTH) domain-containing protein/clathrin assembly protein-related; 8: glutathione S-transferase 6; 9: Glutaredoxin family protein; 10: disease resistance protein (TIR-NBS-LRR class); 11: Histone H3 K4-specific methyltransferase SET7/9 family protein; 12: Disease resistance protein (TIR-NBS-LRR class); 13: HXXXD-type acyl-transferase family protein; 14: F-box family protein; 15: Pathogenesis-related 4

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