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Fig. 6 | BMC Genomics

Fig. 6

From: NMFP: a non-negative matrix factorization based preselection method to increase accuracy of identifying mRNA isoforms from RNA-seq data

Fig. 6

NMFP increases the robustness of SLIDE to the choices of regularization parameter λ, from 0.001 to 0.15 by 0.001. F scores of NMFP + SLIDE (orange) and SLIDE (blue) were calculated at 150 values of λ used in the Lasso regression in SLIDE. NMFP used an NMF rank =3. RNA-seq data were simulated from mouse gene ENSMUSG00000025940, which has 7 subexons and 4 annotated isoforms

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BMC Genomics

ISSN: 1471-2164

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