Fig. 1

Venn diagrams of differentially expressed genes in G- and T-treated samples compared to the controls. a and b show the numbers of up-regulated and down-regulated genes in treated samples, respectively. Up-regulated genes include genes with Log₂(fold change) value ≥ 2, and genes that are present in treated samples but absent in controls; while down-regulated genes include genes with expression Log₂(fold change) value ≤ −2, and genes that are present in controls but absent in treated samples. The numbers in the red and green regions represent the numbers of up- and down-regulated genes in G- and T-treated samples, respectively. The numbers in the orange region represent the numbers of genes that are differentially expressed in both G- and T-treated samples. Numbers outside the Venn diagram represent the total numbers of up- and down-regulated DEGs by both treatments and each treatment