| Hiyo1 | Hiyo6 | Hiyo4 | Hiyo8 |
---|---|---|---|---|
Sequencing platform | GS FLX+ & Ion PGM | GS FLX+ & Ion PGM | PacBio RS II | PacBio RS II |
Scaffolds | 38 | 630 | 1 | 3 |
Contigs | 1,685 | 2,450 | 1 | 3 |
Total genome size (bp) | 5,543,883 a | 2,594,729 a | 3,779,248 | 4,698,617 a |
N50 (bp) | 4,950 | 2,656 | - | - |
Coverage | 20x | 24x | 79x | 42x |
GC content (%) | 63.2 | 63.3 | 65.0 | 63.8 |
CDSs | 5,292 | 3,767 | 5,120 | 7,041 |
rRNAs | 2 | 3 | 12 | 15 |
tRNAs | 51 | 33 | 50 | 53 |