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Table 1 Top GWA SNPs from GEMMA mixed model analysis

From: Identification and validation of risk loci for osteochondrosis in standardbreds

Chr

bp

P-value likelihood ratio test

14

16401778

7.99E-06

14

34284113

1.43E-05

14

17858976

2.77E-05

14

17866794

2.77E-05

14

17626659

5.17E-05

10

56558910

8.32E-05

14

33630011

8.91E-05

21

54501469

1.51E-04

14

34366588

1.55E-04

14

17534553

1.64E-04

1

118288481

1.80E-04

14

36214363

1.83E-04

4

28769871

2.10E-04

21

48322513

2.51E-04

32

108097077

2.88E-04

10

58040174

3.07E-04

2

99965882

3.32E-04

10

72307543

3.89E-04

15

28682409

4.01E-04

24

38866310

4.13E-04

20

16930188

4.72E-04

2

61394335

4.78E-04

20

55342664

4.85E-04

16

50579676

4.93E-04

16

50839833

4.93E-04

16

51040831

4.93E-04

16

51098759

4.93E-04

28

26310499

5.01E-04

14

18305845

5.16E-04

  1. SNPs in bold are moderately associated with disease (1.86 × 10−6 < p < 1.86 × 10−4)
  2. Chr chromosome, bp base pair