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Fig. 7 | BMC Genomics

Fig. 7

From: Cascade: an RNA-seq visualization tool for cancer genomics

Fig. 7

Gene expression differences based on CDKN2A loss. Boxplots of the expression level (log RPKM) of 7 genes implicated in NOTCH signalling are shown, with individual patient RPKM values being shown as dots. For the expression of all genes, patients were grouped based on their copy number loss of CDKN2A (first column) which ablates gene expression. In cases where differences were observed, the significance (based on a Welch two sample t-test) is shown (ns = not significant, * = p < 0.05, ** = p < 0.01)

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