Table 2 Candidate critical genes with putative regulatory functions
Candidate transcriptional regulator | |||||
|---|---|---|---|---|---|
Gene ID | Gene symbol | Description | Molecule type | Expression | Timespan |
MPT Day 0 vs MPT Day 3 | |||||
 XLOC_015643 | CEBPA | CCAAT/enhancer binding protein (C/EBP), alpha | Transcription factor | Up | Short |
 XLOC_013275 | KDM6B | Lysine (K)-specific demethylase 6B | Transcription regulator | Down | Long |
 XLOC_012144 | LOC102562106 | Protein Jumonji-like | Transcription regulator | Down | Long |
 XLOC_012145 | LOC102561337 | Protein Jumonji-like | Transcription regulator | Down | Long |
 XLOC_017186 | CRABP2 | Cellular retinoic acid binding protein 2 | Transporter | Down | Short |
 XLOC_017840 | MYBL2 | v-myb avian myeloblastosis viral oncogene homolog-like 2 | Transcription factor | Down | Short |
 XLOC_006860 | LOC102569158 | Protein Wnt-11-like, transcript variant X2 | Other | Down | Short |
MPT Day 3 vs MPT Day 6 | |||||
 XLOC_006860 | LOC102569158 | Protein Wnt-11-like, transcript variant X2 | Other | Up | Short |
 XLOC_020119 | TNNI2 | Troponin I type 2 (skeletal, fast) | Enzyme | Up | Short |
 XLOC_009637 | MYCL | v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog | Transcription factor | Up | Short |
 XLOC_006593 | LOC102560544 | Elongation factor 1-alpha-like | Other | Up | Short |
 XLOC_003318 | LOC102577358 | Duplex and mab-3 related transcription factor 3-like | Transcription factor | Up | Long |
 XLOC_013828 | LOC102573123 | Transcription factor SOX-9-like | Transcription factor | Up | Long |
 XLOC_014546 | LOC102576325 | Serine/threonine-protein kinase PAK 1-like | Protein kinase | Up | Long |
 XLOC_015643 | CEBPA | CCAAT/enhancer binding protein (C/EBP), alpha | Transcription factor | Up | Short |
 XLOC_012336 | SPTB | Spectrin, beta, erythrocytic, cpytranscript variant X1 | Other | Up | Short |
 XLOC_018228 | LOC102559361 | Endothelin B receptor-like | Receptor | Down | Ambiguous |
 XLOC_003353 | EMX1 | Empty spiracles homeobox 1 | Transcription factor | Down | Short |
MPT Day 6 vs MPT Day 12 | |||||
 XLOC_013828 | LOC102573123 | Transcription factor SOX-9-like | Transcription factor | Up | Long |
 XLOC_019721 | HOXC10 | Homeobox C10 | Transcription factor | Down | Ambiguous |
 XLOC_001928 | ARX | Aristaless related homeobox | Transcription factor | Down | Long |
FPT Day 0 vs FPT Day 3 | |||||
 XLOC_003878 | FABP4 | Fatty acid binding protein 4, adipocyte | Transporter | Up | Ambiguous |
 XLOC_000567 | LUM | Lumican | Other | Up | Short |
 XLOC_012101 | TAGLN3 | Transgelin 3 | Other | Down | Short |
 XLOC_007693 | FZD5 | Frizzled family receptor 5 | Receptor | Down | Short |
 XLOC_017000 | LOC102563625 | cGMP-dependent 3′, 5′-cyclic phosphodiesterase-like | Enzyme | Down | Short |
FPT Day 6 vs FPT Day 12 | |||||
 XLOC_001005 | LOC102577040 | Forkhead box protein L2-like | Transcription factor | Up | Long |
 XLOC_006272 | EYA1 | Eyes absent homolog 1 (Drosophila), transcript variant X1 | Phosphatase | Up | Long |