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Table 1 Summary statistics of differentially expressed (DE) genes at FDR < 0.05

From: RNA sequencing-based analysis of the spleen transcriptome following infectious bronchitis virus infection of chickens selected for different mannose-binding lectin serum concentrations

L10H versus L10L

Higher expression in L10H

No difference

Higher expression in L10L

DE-expressed

Uninfecteds at week 1 (C1)

692

9594

1006

1698

Uninfecteds at week 3 (C2)

774

9868

650

1424

Infected at week 1 (C3)

931

9358

1003

1934

Infected at week 3 (C4)

508

10426

358

866

  1. Comparison between the two lines, L10H and L10L, uninfected and infected birds at two time points (weeks 1 and 3). Comparisons C1 – C4 correspond to differential gene expression comparisons presented in Fig. 1