Fig. 4

KOG, KEGG and GO classifications of predicted genes in O. mirabilis UM 578. a Distribution of KOG classes. i) Information storage and processing caterory: J, Translation, ribosomal structure and biogenesis; A, RNA processing and modification; K, Transcription; L, Replication, recombination and repair and B, Chromatin structure and dynamics. ii) Cellular processes and signalling category: D, Cell cycle control, cell division, chromosome partitioning; Y, Nuclear structure; V, Defense mechanisms; T, Signal transduction mechanisms; M, Cell wall/membrane/envelope biogenesis; N, Cell motility; Z, Cytoskeleton; W, Extracellular structures; U, Intracellular trafficking, secretion, and vesicular transport and O, Posttranslational modification, protein turnover, chaperones. iii) Metabolism category: C, Energy production and conversion; G, Carbohydrate transport and metabolism; E, Amino acid transport and metabolism; F, Nucleotide transport and metabolism; H, Coenzyme transport and metabolism; I, Lipid transport and metabolism; P, Inorganic ion transport and metabolism and Q, Secondary metabolites biosynthesis, transport and catabolism. iv) Poorly characterised category: R, General function prediction only and S, Function unknown. b KEGG metabolic pathway distribution. c Distribution of GO annotations