Table 1 Key differentially expressed genes in the embryo under ABA and H2O2 treatments
Genes | Functional classes | Fold-change | ||
|---|---|---|---|---|
BINs | subBINs | ABA vs CK | H2O2 vs CK | |
CK212552 | Metabolic pathways (assigned genes: 22) | PS.calvincyle. rubisco small subunit | 1.6 | 3.53 |
AL820663 | major CHO metabolism.degradation.starch.starch cleavage | 0.083 | 0.18 | |
CA720455 | major CHO metabolism.degradation.starch.starch cleavage | 0.21 | 0.35 | |
BF293263 | major CHO metabolism.degradation.starch.starch cleavage | 0.3 | 0.41 | |
CA644563 | major CHO metabolism.degradation.starch.starch cleavage | 0.14 | 0.23 | |
CD452594 | minor CHO metabolism.raffinose family.raffinosesynthases.putative | 0.43 | 0.65 | |
BQ166746 | minor CHO metabolism.others | 0.43 | 0.33 | |
CD373448 | minor CHO metabolism.others | 2.39 | 1.54 | |
CA741454 | minor CHO metabolism.others | 0.42 | 1.78 | |
CD928919 | cell wall.degradation.mannan-xylose-arabinose-fucose | 0.34 | 0.57 | |
BQ838005 | cell wall.modification | 0.46 | 0.37 | |
AY491968 | N-metabolism.ammonia metabolism.glutamine synthase | 0.31 | 0.47 | |
BJ263780 | N-metabolism.ammonia metabolism.glutamine synthase | 0.39 | 0.55 | |
BJ266589 | amino acid metabolism.synthesis.aromatic aa.tryptophan.indole-3-glycerol phosphate synthase | 0.36 | 0.58 | |
CK154440 | secondary metabolism.phenylpropanoids | 0.61 | 1.66 | |
BJ231180 | secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL | 0.29 | 1.53 | |
BJ291883 | misc.cytochrome P450 | 2.39 | 0 | |
CA670423 | misc.misc2 | 1.75 | 0.73 | |
BQ169475 | misc.gluco-, galacto- and mannosidases | 0.46 | 0.52 | |
BE429383 | misc.gluco-, galacto- and mannosidases | 0.44 | 0.64 | |
CK215975 | misc.oxidases - copper, flavone etc. | 0.41 | 0.56 | |
CA669389 | misc.plastocyanin-like | 6.05 | 1.68 | |
CA602902 | Development proteins (assigned genes: 3) | stress.biotic | 0.2 | 0.54 |
CA602902 | stress.biotic | 0.22 | 0.53 | |
BJ224721 | development.unspecified | 0.38 | 1.43 | |
CA652678 | Hormones and Signaling (assigned genes: 4) | hormone metabolism.ethylene.synthesis-degradation | 0.28 | 0.58 |
CA484005 | hormone metabolism.ethylene.signal transduction | 2.6 | 1.88 | |
CD928643 | hormone metabolism.ethylene.signal transduction | 0.48 | 0.65 | |
BE604829 | hormonemetabolism.jasmonate.synthesis-degradation.lipoxygenase | 0.62 | 1.45 | |
CD919701 | Cellular processes (assigned genes: 32) | RNA.regulation of transcription.putative transcription regulator | 19.23 | 0.12 |
BJ274465 | DNA.synthesis/chromatin structure.histone | 0.18 | 1.65 | |
BJ225202 | DNA.synthesis/chromatin structure.histone | 0.13 | 1.67 | |
BJ306445 | DNA.synthesis/chromatin structure.histone | 0.13 | 1.59 | |
BJ217006 | DNA.synthesis/chromatin structure.histone | 0.14 | 1.65 | |
BJ320258 | DNA.synthesis/chromatin structure.histone | 0.13 | 1.77 | |
BJ308545 | DNA.synthesis/chromatin structure.histone | 0.21 | 1.69 | |
CA719316 | DNA.synthesis/chromatin structure.histone | 0.16 | 1.58 | |
BJ221397 | DNA.synthesis/chromatin structure.histone | 0.22 | 1.58 | |
BJ231541 | DNA.synthesis/chromatin structure.histone | 0.31 | 1.56 | |
BJ308545 | DNA.synthesis/chromatin structure.histone | 0.24 | 1.69 | |
BJ320258 | DNA.synthesis/chromatin structure.histone | 0.17 | 1.53 | |
BJ308450 | DNA.synthesis/chromatin structure.histone | 0.15 | 1.58 | |
BJ219603 | DNA.synthesis/chromatin structure.histone | 0.2 | 1.61 | |
CK209895 | DNA.synthesis/chromatin structure.histone | 0.19 | 1.57 | |
BJ209178 | DNA.synthesis/chromatin structure.histone | 0.27 | 1.7 | |
CK209895 | DNA.synthesis/chromatin structure.histone | 0.21 | 1.57 | |
BJ214272 | DNA.synthesis/chromatin structure.histone | 0.27 | 1.57 | |
BJ318011 | DNA.synthesis/chromatin structure.histone | 0.17 | 1.7 | |
BJ229643 | DNA.synthesis/chromatin structure.histone | 0.28 | 1.61 | |
CK217164 | DNA.synthesis/chromatin structure.histone | 0.21 | 2.02 | |
BJ305771 | DNA.synthesis/chromatin structure.histone | 0.12 | 1.72 | |
BJ277068 | DNA.synthesis/chromatin structure.histone | 0.38 | 1.63 | |
BJ306762 | DNA.synthesis/chromatin structure.histone | 0.46 | 1.49 | |
BJ308450 | DNA.synthesis/chromatin structure.histone | 0.15 | 1.61 | |
BJ306762 | DNA.synthesis/chromatin structure.histone | 0.44 | 1.44 | |
BJ207229 | DNA.synthesis/chromatin structure.histone | 0.5 | 1.37 | |
CA712796 | protein.postranslational modification | 0.39 | 0.62 | |
BQ169109 | protein.degradation.cysteine protease | 0.47 | 0.21 | |
AJ612538 | protein.degradation.cysteine protease | 0.4 | 0.27 | |
CK208190 | protein.degradation.serine protease | 0.5 | 0.41 | |
BJ296643 | protein.degradation.ubiquitin.E2 | 2.31 | 0.55 | |
BF200045 | Miscellanious (assigned genes: 3) | metal handling. binding.chelation and storage | 0.48 | 0.55 |
CA729143 | metal handling.binding. chelation and storage | 0.36 | 0.36 | |
CA666515 | metal handling.binding. chelation and storage | 0.34 | 0.38 | |