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Table 1 The species used in this study

From: Tandem amino acid repeats in the green anole (Anolis carolinensis) and other squamates may have a role in increasing genetic variability

Taxonomy

Scientific name

Common name

Collection locality or source

Amphibia

Gymnophiona

Ichthyophis bannanicus a

Banna caecilian

Beiliu, Guangxi, China

 

Xenopodinae

Xenopus tropicalis b

Western clawed frog

GenBank

Reptilia

Dibamidae

Dibamus bourreti a

Bourret's blind skink

Hongkong, China

 

Gekkonidae

Hemidactylus bowringii a

House Gecko

Guangzhou, Guangdong, China

 

Scincidae

Plestiodon fasciatus a

Common Five-lined Skink

MCB249, gift from Matt Brandley

 

Amphisbaenidae

Amphisbaena caeca a

Puerto Rican worm lizard

MVZ Herps 232753

 

Bipedidae

Bipes biporus a

Five-toed worm lizard

MVZ Herps 236257

 

Agamidae

Calotes versicolor a

Garden lizard

Guangzhou, Guangdong, China

 

Iguanidae

Anolis carolinensis b

Green anole

GenBank

 

Anguidae

Anguis fragilis a

Slow worm

MVZ Herps 238523

 

Varanidae

Varanus salvator a

Water monitor

Jiangmen, Guangdong, China

 

Elapidae

Naja atra a

Chinese cobra

Shaoguan, Guangdong, China

 

Typhlopidae

Ramphotyphlops braminus a

Brahminy blind snake

Hongkong, China

 

Galliformes

Gallus gallusdomesticus

Chicken

GenBank or Ensembl

 

Estrildidae

Taeniopygia guttata b

Zebra finch

GenBank

 

Trionychidae

Pelodiscus sinensis b

Chinese softshell turtle

GenBank

Mammal

Ornithorhynchidae

Ornithorhynchus anatinus

Duckbill platypus

GenBank or Ensembl

 

Macropodidae

Macropus eugenii

Tammar wallaby

GenBank

 

Didelphidae

Monodelphis domestica

Gray short-tailed opossum

GenBank

 

Elephantidae

Loxodonta Africana

African bush elephant

GenBank

 

Pteropodidae

Pteropus vampyrus

Large flying fox

GenBank

 

Canidae

Canis familiaris

Dog

GenBank or Ensembl

 

Bovidae

Bos Taurus

Cow

GenBank

 

Leporidae

Oryctolagus cuniculus

Rabbit

GenBank

 

Muridae

Mus musculus b

Mouse

GenBank

 

Leporidae

Oryctolagus cuniculus

Rabbit

GenBank

 

Hominidae

Homo sapiens b

Human

GenBank

  1. GenBank or Ensembl means that Hox genes for these species were downloaded from these public databases
  2. a Hox gene fragments were de novo sequenced in this study, b species were also used in proteomic-scale analyses