Fig. 4
From: Genome-wide mosaicism within Mycobacterium abscessus: evolutionary and epidemiological implications
Circular representation of MAB subspecies reference and admixed strains. a: M. abscessus, b: M. massiliense. c: M. bolletii. d: M. massiliense strain M139, e: M. abscessus strain 137, f: M. massiliense strain 23. For the outer circle, colours were reported following subspecies identification (red: M. abscessus, blue: M. massiliense. yellow: M. bolletii, black: regions with no significant subspecies attribution or not belonging to core genome). From outer to inner circle: subspecies type identification; GC% in 5-kb non-overlapping windows (yellow: higher than 64Â %; green: lower than 64Â %); GC skew in 5-kb non-overlapping windows (red: positive; blue: negative); sequenced genes for identification studies (MLST genes and rpoB) in grey; prophage regions in green; tRNA in magenta; and IS element in orange. Circular plots were generated by using CIRCOS [79]