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Table 2 Regulatory proteins significantly changing in their abundance. Up- and down-regulated DNA binding proteins, kinases and phosphatases (p < 0.01). Best BlastP hits for S. cerevisiae and N. crassa are shown

From: Multi-omics analysis reveals regulators of the response to nitrogen limitation in Yarrowia lipolytica

  

Change (Log2)

Std. Dev.

S. cerevisiae

N. crassa

Gene

Blast2GO annotation

Gene

Symbol

Gene

Symbol

Up-regulated

       

YALI0F16511g

dna-binding domain of mlu1-box binding protein mbp1

1.81

0.29

-

-

NCU06339

-

YALI0D20482g

nitrogen regulatory protein area

1.05

0.28

YER040W

GLN3

NCU09068

amr

YALI0E16577g

zinc-finger inhibitor of ho transcription

0.87

0.12

YKL185W

ASH1

-

-

YALI0F18788g

srf-type transcription factor

0.59

0.20

YBR182C

SMP1

NCU02558

-

YALI0C22682g

gata transcription factor

0.53

0.14

-

-

NCU15829

-

YALI0C11671g

nucleosome binding protein

0.52

0.10

YBR089C-A

NHP6B

NCU09995

-

YALI0E28897g

rna polymerase ii transcriptional coactivator

0.41

0.25

-

-

NCU04584

-

YALI0B20944g

c6 finger domain

0.38

0.14

-

-

NCU07675

-

YALI0A09020g

transcription factor

0.38

0.07

YNL257C

SIP3

NCU00495

-

YALI0D17996g

nhp10p

0.36

0.20

YDL002C

NHP10

NCU07568

-

YALI0C19151g

acetate regulatory dna binding protein

0.36

0.10

YMR280C

CAT8

NCU06656

acu-15

YALI0E08184g

cbf nf-y family transcription factor

0.34

0.09

YER159C

BUR6

NCU06405

pole-3

YALI0C22187g

membrane protein

0.34

0.10

YHR101C

BIG1

-

-

YALI0E18656g

c6 finger domain

0.33

0.18

-

-

-

-

YALI0E28721g

ssdna binding protein

0.26

0.14

-

-

-

-

YALI0F17468g

potential fungal transcription factor

0.22

0.09

-

-

NCU05051

col-23

YALI0A21241g

potential zinc finger protein

0.21

0.08

-

-

NCU02994

-

YALI0F11011g

rme1p

0.19

0.09

YGR044C

RME1

-

-

YALI0A10637g

fungal specific transcription factor domain-containing protein

0.19

0.06

-

-

NCU01478

-

YALI0F16852g

lim homeobox protein

0.17

0.04

-

-

NCU03593

kal-1

YALI0D14542g

camp-dependent protein kinase-

0.56

0.12

YHR205W

SCH9

NCU03200

stk-10

YALI0C04587g

protein kinase

0.53

0.22

YLL019C

KNS1

NCU00230

prk-4

YALI0D07150g

protein kinase

0.41

0.21

YKL116C

PRR1

NCU04143

stk-26

YALI0D25388g

serine threonine protein kinase

0.26

0.09

YGL180W

ATG1

NCU00188

apg-1

YALI0D16863g

casein kinase ii subunit alpha

0.23

0.06

YIL035C, YOR061W

CKA1, CKA2

NCU03124

cka

YALI0B04840g

serine threonine protein

0.17

0.08

YPL236C

ENV7

NCU07399

stk-9

YALI0F12617g

mitochondrially localized type 2c protein phosphatase

0.51

0.13

YHR076W

PTC7

NCU02749

-

Down-regulated

    

YALI0F15169g

transcription factor

−0.52

0.17

YBR083W

TEC1

NCU02612

-

YALI0F05126g

phosphorus acquisition-controlling protein

−0.43

0.22

-

-

NCU09315

nuc-1

YALI0D05687g

mgmt family protein

−0.36

0.11

-

-

NCU11088

-

YALI0A17292g

air2p

−0.33

0.19

YDL175C

AIR2

NCU04617

-

YALI0E30789g

c2h2 finger domain

−0.33

0.18

-

-

NCU06503

-

YALI0E03432g

arc1p

−0.31

0.10

YGL105W

ARC1

NCU06307

-

YALI0D01573g

cell pattern formation-associated protein stua

−0.28

0.14

YMR016C

SOK2

NCU01414

asm-1

YALI0B12166g

multiprotein-bridging factor 1

−0.21

0.12

YOR298C-A

MBF1

NCU01422

mbf1

YALI0D07744g

YALI0D07744p

−0.20

0.12

-

-

-

-

YALI0F14267g

stromal membrane-associated protein

−0.15

0.09

YIL044C

AGE2

NCU03890

-

YALI0D19470g

mst3-like protein

−0.60

0.30

YDR523C

SPS1

NCU04096

prk-9

YALI0C00891g

serine threonine protein kinase

−0.52

0.15

YCR008W

SAT4

NCU06179

stk-5

YALI0C21758g

serine threonine protein kinase

−0.40

0.18

YPL141C, YOR233W

FRK1, KIN4

NCU00914

stk-16

YALI0C22770g

pkinase-domain-containing protein

−0.31

0.14

YNL298W, YOL113W

CLA4, SKM1

NCU00406

Vel

YALI0E06501g

agc akt protein kinase

−0.19

0.10

YKL126W, YMR104C

YPK1, YPK2

NCU07280

ypk1

YALI0B20438g

phosphoserine phosphatase

−0.34

0.10

YGR208W

SER2

NCU02004

ser-3