|  |  |  |  |  | GENOS (n = 1,042) | TwinsUK (n = 5,654) | Meta-analysis (n = 6,696) |  | ||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Locus | rsID | EA | OA | EAF | Beta | P | Beta | P | Beta | SE | P value | Nearby genes |
Spine BMD | 1p31.3 | rs2566752 | C | T | 0.38 | 0.28 | 2.3E-5 | 0.14 | 1.3E-6 | 0.16 | 0.03 | 3.4E-9 | WLS |
4q28.1 | rs4423886 | C | T | 0.19 | −0.17 | 0.07 | −0.22 | 4.6E-7 | −0.21 | 0.04 | 2.5E-7 | FAT4 | |
6q25.1 | rs1038304 | G | A | 0.51 | −0.21 | 8.3E-4 | −0.12 | 1.8E-5 | −0.13 | 0.03 | 1.8E-7 | CCDC170/ESR1 | |
7p22.1 | rs188966536 | T | G | 0.02 | 1.21 | 1.8E-6 | 0.51 | 1.6E-4 | 0.67 | 0.12 | 7.8E-8 | CCZ1B | |
8q13.1 | rs76115211 | A | T | 0.07 | −0.30 | 0.04 | −0.35 | 7.9E-7 | −0.34 | 0.07 | 3.0E-7 | LINC00251 | |
10q22.3 | rs114936111 | A | G | 0.22 | 0.29 | 3.0E-4 | 0.14 | 4.1E-5 | 0.16 | 0.03 | 3.6E-7 | KCNMA1 | |
Femoral Neck BMD | 2p12 | rs12998155 | C | T | 0.45 | −0.15 | 6.7E-3 | −0.13 | 8.0E-7 | −0.13 | 0.02 | 5.4E-8 | CTNNA2 |
4p13 | rs17885864 | T | G | 0.03 | −0.56 | 1.6E-3 | −0.35 | 4.2E-6 | −0.38 | 0.07 | 1.3E-7 | PHOX2B | |
6q21 | rs117359272 | G | C | 0.02 | 0.55 | 5.8E-3 | 0.38 | 1.6E-5 | 0.41 | 0.08 | 4.6E-7 | LINC00222 | |
10p11.23 | rs73245065 | G | C | 0.02 | −0.70 | 1.0E-4 | −0.32 | 1.4E-5 | −0.37 | 0.07 | 6.9E-8 | LYZL2 | |
11q22.1 | rs10893396 | C | G | 0.17 | 0.17 | 0.02 | 0.14 | 5.9E-6 | 0.15 | 0.03 | 4.1E-7 | CNTN5 | |
12q21.33 | rs191780267 | C | T | 0.01 | 0.69 | 0.02 | 0.57 | 4.7E-6 | 0.59 | 0.11 | 4.1E-7 | LOC728084 | |
Total Hip BMD | 5q13.1 | rs78935958 | G | T | 0.06 | −0.38 | 2.8E-3 | −0.24 | 6.1E-6 | −0.26 | 0.05 | 1.9E-7 | LOC101928858/PIK3R1 |
6q21 | rs117359272 | G | C | 0.02 | 0.56 | 1.9E-3 | 0.35 | 2.9E-5 | 0.39 | 0.08 | 3.6E-7 | LINC00222 | |
9q22.31 | rs1907805 | T | C | 0.04 | 0.21 | 0.18 | 0.33 | 2.5E-7 | 0.31 | 0.06 | 2.9E-7 | ROR2 |