Establishing gene models from the Pinus pinaster genome using gene capture and BAC sequencing

BMC Genomics

Table 1 Exon length comparisons among complete AS genes from P. pinaster and AS from two angiosperm plants

Exon length (nt)	Pinus pinaster AS1/AS3/AS5	ASN_BAC	Arabidopsis thaliana ASN3 (At5g10240)	Arabidopsis thaliana ASN1 (At3g47340)	Populus trichocarpa AS (Potri.009G072900)	Populus trichocarpa AS (Potri.005G075700)
E1	80	80	80	80	80	80
E2	139	139	139	139	139	139
E3	96	96	100	96	96	96
E4	142	142	135	333	142	142
E5	96	96	96		191	96
E6	98	98	98		191	95
E7	162	162	162	162	162	162
E8	81	81	84	303	81	81
E9	222	222	222	303	222	222
E10	135	135	129	135	135	135
E11	81/84*	81	81	168	81	81
E12	87	87	87	168	87	87
E13	108	108	108	108	108	108
E14	252/243/240	252	78	231	246	231

ISSN: 1471-2164