From: BASE: a practical de novo assembler for large genomes using long NGS reads
Read_num | Read_length | With GPU | Without GPU | Time fold | |
---|---|---|---|---|---|
S.aureus MW2 | 6,720,000 | 100 | 133 s | 184 s | 1.38 |
V.para | 4,896,000 | 250 | 329 s | 514 s | 1.56 |
YH, 100 bp | 1,057,750,382 | 100 | 5 h | 19 h | 3.80 |
NA12878, 150 bp | 770,960,980 | 150 | 7 h | 30 h | 4.29 |