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Table 2 Numbers of BLAST hits for genes implicated in bacterial cold shock response in all strains used in this study

From: Genomic mechanisms for cold tolerance and production of exopolysaccharides in the Arctic cyanobacterium Phormidesmis priestleyi BC1401

Gene

Number of BLAST hits

Phormidesmis priestleyi BC1401

Leptolyngbya boryana PCC 6306

Oscillatoriales cyanobacterium JSC12

Geitlerinema sp. PCC7407

aceE

1

2

2

1

aceF

1

2

1

1

csp-family

1

1

0

1

deaD

1

1

1

1

desAB

2

2

1

2

dnaA

1

1

1

1

gyrA

2

2

2

2

dnaK a

5

5

6

4

dnaJ a

1

1

1

1

hupB

4

3

3

1

infA/IF-1

1

1

1

1

infB/IF-2

1

1

1

1

infC/IF-3

1

1

2

2

nusA

1

1

1

1

otsA

0

0

0

1

pnp

1

1

1

1

rnr

1

1

1

1

rbfA

1

1

1

1

recA

1

1

1

1

tig

1

1

1

1

yfiA

1

0

1

1

Total

29

29

29

27

  1. Compiled from Barria et al. [5] and Varin et al. [66]. Chaperones also involved in heat shock are marked with a