Table 1 Summary of mapping result (mapping to reference genes)
Sample ID | Replication | Total clean reads | Total mapped reads | Perfect match | < =2 bp Mismatch | Unique match | Multi-position match | Total unmapped reads |
|---|---|---|---|---|---|---|---|---|
S1-ER | 1 | 11,449,209 | 7,690,109 | 5,586,546 | 2,103,563 | 6,965,933 | 724,176 | 3,759,100 |
2 | 12,335,056 | 8,503,080 | 6,180,851 | 2,322,229 | 7,754,062 | 749,018 | 3,831,976 | |
S1-BR | 1 | 12,023,993 | 7,810,160 | 5,641,877 | 2,168,283 | 7,025,399 | 784,761 | 4,213,833 |
2 | 12,257,878 | 8,266,679 | 6,035,647 | 2,231,032 | 7,515,875 | 750,804 | 3,991,199 | |
S2-ER | 1 | 11,446,627 | 7,898,285 | 5,754,463 | 2,143,822 | 7,206,860 | 691,425 | 3,548,342 |
2 | 12,233,415 | 8,595,851 | 6,260,690 | 2,335,161 | 7,834,426 | 761,425 | 3,637,564 | |
S2-BR | 1 | 11,613,232 | 7,691,237 | 5,608,986 | 2,082,251 | 7,015,241 | 675,996 | 3,921,995 |
2 | 11,917,155 | 8,085,290 | 5,876,588 | 2,208,702 | 7,289,596 | 795,694 | 3,831,865 | |
S3-ER | 1 | 11,802,971 | 8,121,699 | 5,958,191 | 2,163,508 | 7,391,705 | 729,994 | 3,681,272 |
2 | 12,408,764 | 8,537,515 | 6,189,025 | 2,348,490 | 7,784,021 | 753,494 | 3,871,249 | |
S3-BR | 1 | 11,421,119 | 7,177,782 | 5,221,853 | 1,955,929 | 6,549,727 | 628,055 | 4,243,337 |
2 | 11,762,649 | 7,523,532 | 5,479,311 | 2,044,221 | 6,784,105 | 739,427 | 4,239,117 |