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Table 1 The distribution of different nucleotide repeats in watermelon genome

From: Genome wide characterization of simple sequence repeats in watermelon genome and their application in comparative mapping and genetic diversity analysis

Nucleotide

Number of loci identified

Frequency (%)

Mean repeat number

Number of loci primer designed

Percentage SSRs suitable for primer design (%)

Di

13474

34.09

12.29

11353

84.26

Tri

8947

22.64

10.56

7718

86.26

Tetra

5465

13.83

5.72

4552

83.29

Penta

4205

10.64

4.43

3681

87.54

Hexa

2082

5.28

4.43

1938

93.08

Hepta

4059

10.27

3.19

3412

84.06

Octo

1291

3.27

3.14

1156

89.54

Total

39523

100

 

33810

85.55