Fig. 5

Manhattan plots of genome-wide association studies (GWAS) for the WGP (a) and FT (b) measured with the mixed linear model (MLM) using the best linear unbiased prediction (BLUP) values for the four environments. The SNP locus rs13562854 is indicated by the black arrow. The general and highly significant trait-associated SNPs are distinguished by the red and blue threshold lines, respectively