Table 4 Candidate genes most highly associated with early maturity within 500Â kb of either side of the SNP locus rs13562854
#GeneID | Start | Stop | Direction | Distance to SNP (kb) | Annotation |
|---|---|---|---|---|---|
CotAD_01929 | 13482736 | 13483020 | Forward | 79.83 | Â |
CotAD_01940 | 13836983 | 13837348 | Reverse | 274.13 | Tetratricopeptide repeat-like superfamily protein, putative |
CotAD_01935 | 13685536 | 13686374 | Reverse | 122.68 | Zinc finger protein, putative isoform 1 |
CotAD_01920 | 13173869 | 13177058 | Forward | 385.80 | Enolase 1, chloroplastic-like protein |
CotAD_01932 | 13669620 | 13671044 | Reverse | 106.77 | Zinc finger protein, putative isoform 1 |
CotAD_01921 | 13215464 | 13215928 | Reverse | 346.93 | Proline and serine-rich 1 |
CotAD_01931 | 13641931 | 13643458 | Reverse | 79.08 | Ribonuclease P subunit p30 |
CotAD_01934 | 13680075 | 13680812 | Forward | 117.22 | Hypothetical protein F383_23360 |
CotAD_01930 | 13549901 | 13550143 | Forward | 12.71 | Â |
CotAD_01939 | 13835211 | 13836617 | Forward | 272.36 | UDP-glycosyltransferase 89B1-like |
CotAD_01941 | 13837426 | 13838590 | Reverse | 274.57 | Tetratricopeptide repeat-like superfamily protein, putative |
CotAD_01943 | 13894122 | 13897285 | Reverse | 331.27 | Hypothetical protein F383_21541 |
CotAD_01949 | 14027015 | 14029396 | Reverse | 464.16 | ADP, ATP carrier protein ER-ANT1-like |
CotAD_01928 | 13425578 | 13427698 | Reverse | 135.16 | DNA-directed RNA polymerases I and III subunit RPAC1 |
CotAD_01944 | 13922306 | 13923205 | Forward | 359.45 | Â |
CotAD_01942 | 13839501 | 13840400 | Reverse | 276.65 | UDP-glucosyl transferase 89B1, putative |
CotAD_01919 | 13169627 | 13172234 | Forward | 390.62 | DnaJ, mitochondrial |
CotAD_01937 | 13763420 | 13764002 | Forward | 200.57 | Â |
CotAD_01926 | 13313301 | 13314846 | Forward | 248.01 | Zinc finger CONSTANS-LIKE 2-like protein |
CotAD_01915 | 13095428 | 13096529 | Forward | 466.33 | UDP-N-acetylmuramoyl-alanine-D-glutamate ligase |
CotAD_01922 | 13233921 | 13234454 | Forward | 328.40 | Â |
CotAD_01914 | 13066571 | 13067059 | Forward | 495.80 | Agamous-like MADS-box protein A |
CotAD_01938 | 13771588 | 13773328 | Forward | 208.73 | Crooked neck-like protein 1 |
CotAD_01924 | 13252910 | 13256745 | Forward | 306.11 | Serine/threonine protein kinase 16 |
CotAD_01946 | 13990075 | 13991007 | Forward | 427.22 | OBF-binding protein 4, putative |
CotAD_01948 | 14020947 | 14021135 | Reverse | 458.09 | Hypothetical protein CISIN_1g035470mg |
CotAD_01947 | 14015684 | 14017498 | Reverse | 452.83 | MADS-box protein |
CotAD_01918 | 13135919 | 13143770 | Forward | 419.08 | Putative acyl-activating enzyme 17, peroxisomal-like protein |
CotAD_01945 | 13956974 | 13957540 | Reverse | 394.12 | ARM repeat superfamily protein |
CotAD_01923 | 13236335 | 13238168 | Forward | 324.69 | Hypothetical protein F383_15236 |
CotAD_01916 | 13103756 | 13106200 | Forward | 456.65 | Â |
CotAD_01936 | 13717384 | 13722424 | Reverse | 154.53 | WD repeat and HMG-box DNA-binding 1 |