Table 1 Table of top 20 GO terms and top 10 KEGG terms for the genes of functional modules
Category | Term | Count | Percent | P-value | Benjiamini |
|---|---|---|---|---|---|
GOTERM_BP_FAT | regulation of apoptosis | 19 | 22.6 | 5.10E-07 | 7.30E-04 |
GOTERM_BP_FAT | regulation of programme cell death | 19 | 22.6 | 5.90E-07 | 4.20E-04 |
GOTERM_BP_FAT | regulation of cell death | 19 | 22.6 | 6.20E-07 | 3.00E-04 |
GOTERM_BP_FAT | negative regulation of apoptosis | 13 | 15.5 | 7.90E-07 | 2.80E-04 |
GOTERM_BP_FAT | negative regulation of programmed cell death | 13 | 15.5 | 9.10E-07 | 2.60E-04 |
GOTERM_BP_FAT | negative regulation of cell death | 13 | 15.5 | 9.40E-07 | 2.20E-04 |
GOTERM_BP_FAT | membrane organization | 13 | 15.5 | 1.70E-06 | 3.50E-04 |
GOTERM_BP_FAT | vesicle-mediated transport | 15 | 17.9 | 4.50E-06 | 8.10E-04 |
GOTERM_BP_FAT | membrane invagination | 10 | 11.9 | 4.70E-06 | 7.40E-04 |
GOTERM_BP_FAT | endocytosis | 10 | 11.9 | 4.70E-06 | 7.40E-04 |
GOTERM_BP_FAT | response to hypoxia | 8 | 9.5 | 1.20E-05 | 1.70E-03 |
GOTERM_BP_FAT | response to oxygen levels | 8 | 9.5 | 1.60E-05 | 2.10E-03 |
GOTERM_BP_FAT | response to inorganic substance | 9 | 10.7 | 2.30E-05 | 2.70E-03 |
GOTERM_BP_FAT | anti-apoptosis | 9 | 10.7 | 2.40E-05 | 2.60E-03 |
GOTERM_BP_FAT | positive regulation of multicellular organismal process | 9 | 10.7 | 7.90E-05 | 8.00E-03 |
GOTERM_BP_FAT | drug metabolic process | 4 | 4.8 | 9.80E-05 | 9.20E-03 |
GOTERM_BP_FAT | response to metal ion | 7 | 8.3 | 9.80E-05 | 8.70E-03 |
GOTERM_BP_FAT | phagocytosis | 5 | 6 | 1.60E-04 | 1.40E-02 |
GOTERM_BP_FAT | response to organic substance | 14 | 16.7 | 2.20E-04 | 1.80E-02 |
GOTERM_BP_FAT | regulation of tube size | 5 | 6 | 2.40E-04 | 1.80E-02 |
KEGG_PATHWAY | Metabolism of xenobiotics by cytochrome P450 | 6 | 7.1 | 2.00E-04 | 1.70E-02 |
KEGG_PATHWAY | Retinol metabolism | 5 | 6 | 1.40E-03 | 6.00E-02 |
KEGG_PATHWAY | Drug metabolism | 5 | 6 | 2.40E-03 | 6.70E-02 |
KEGG_PATHWAY | Linoleic acid metabolism | 3 | 3.6 | 2.70E-02 | 4.50E-01 |
KEGG_PATHWAY | Pathways in cancer | 8 | 9.5 | 2.90E-02 | 4.00E-01 |
KEGG_PATHWAY | Focal adhesion | 6 | 7.1 | 3.70E-02 | 4.10E-01 |
KEGG_PATHWAY | Porphyrin and chlorophyll metabolism | 3 | 3.6 | 3.70E-02 | 3.70E-01 |
KEGG_PATHWAY | Small cell lung cancer | 4 | 4.8 | 4.20E-02 | 3.70E-01 |
KEGG_PATHWAY | ECM-receptor interaction | 4 | 4.8 | 4.20E-02 | 3.70E-01 |
KEGG_PATHWAY | TGF-beta signaling pathway | 4 | 4.8 | 4.60E-02 | 3.60E-01 |