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Table 3 Cell lines annotation of breast carcinoma

From: Comprehensive comparison of molecular portraits between cell lines and tumors in breast cancer

Cell line name

Gender

Hist subtype1

Source

ER

PR

Her2

PAM50 mRNA

Our classification

AU565

F

 

ATCC

-

-

+

Her2amp

Her2amp

BT-20

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

BT-474

F

ductal_carcinoma

ATCC

+

+

+

Luminal B

Luminal B

BT-483

F

ductal_carcinoma

ATCC

+

+

-

Luminal A

Luminal A

BT-549

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

CAL-120

F

 

DSMZ

-

-

-

Basal-like

Basal-like

CAL-148

F

ductal_carcinoma

DSMZ

-

-

-

Luminal B

Basal-like

CAL-51

F

 

DSMZ

-

-

-

Basal-like

Basal-like

CAL-85-1

F

 

DSMZ

-

-

-

Basal-like

Basal-like

CAMA-1

F

 

ATCC

+

-

-

Luminal B

Luminal A

DU4475

F

 

ATCC

-

-

-

Basal-like

Basal-like

EFM-19

F

ductal_carcinoma

DSMZ

+

+

-

Luminal B

Luminal A

EFM-192A

F

 

DSMZ

+

-

+

Her2amp

Luminal B

EVSA-T

F

 

DSMZ

+

-

+

NON

Luminal B

HCC1143

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

HCC1187

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

HCC1395

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

HCC1419

F

ductal_carcinoma

ATCC

-

-

+

Her2amp

Her2amp

HCC1428

F

 

ATCC

+

+

-

Luminal B

Luminal A

HCC1500

F

ductal_carcinoma

ATCC

-

-

-

Luminal A

Basal-like

HCC1569

F

metaplastic_carcinoma

ATCC

-

-

+

Basal-like

Her2amp

HCC1599

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

HCC1806

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

HCC1937

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

HCC1954

F

ductal_carcinoma

ATCC

-

-

+

Her2amp

Her2amp

HCC202

F

ductal_carcinoma

ATCC

-

-

+

Her2amp

Her2amp

HCC2157

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

HCC2218

F

ductal_carcinoma

ATCC

-

-

+

Luminal A

Her2amp

HCC38

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

HCC70

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

HDQ-P1

F

ductal_carcinoma

DSMZ

-

-

-

Basal-like

Basal-like

HMC-1-8

F

 

HSRRB

   

NON

Luminal A

Hs 274.T

F

 

ATCC

   

Basal-like

Luminal B

Hs 281.T

F

 

ATCC

   

Basal-like

Her2amp

Hs 343.T

F

 

ATCC

   

Basal-like

Her2amp

Hs 578 T

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

Hs 606.T

F

 

ATCC

   

Luminal A

Luminal B

Hs 739.T

F

 

ATCC

   

Basal-like

Basal-like

Hs 742.T

F

 

ATCC

   

Luminal A

Luminal A

JIMT-1

F

ductal_carcinoma

DSMZ

-

-

 

Basal-like

Her2amp

KPL-1

F

ductal_carcinoma

DSMZ

   

Luminal A

Basal-like

MCF7

F

 

ATCC

+

+

-

Luminal A

Luminal A

MDA-MB-134-VI

F

ductal_carcinoma

ATCC

+

-

 

Luminal A

Luminal A

MDA-MB-157

F

ductal_carcinoma

ATCC

-

-

-

Basal-like

Basal-like

MDA-MB-175-VII

F

ductal_carcinoma

ATCC

+

-

 

Luminal B

Luminal A

MDA-MB-231

F

 

ATCC

-

-

 

Basal-like

Basal-like

MDA-MB-361

F

 

ATCC

+

+

+

Luminal B

Luminal B

MDA-MB-415

F

 

ATCC

+

-

-

Luminal B

Luminal A

MDA-MB-436

F

 

ATCC

-

-

-

Basal-like

Basal-like

MDA-MB-453

F

 

ATCC

-

-

-

Luminal B

Her2amp

MDA-MB-468

F

 

ATCC

-

-

-

Basal-like

Basal-like

SK-BR-3

F

 

ATCC

-

-

+

Her2amp

Her2amp

T-47D

F

ductal_carcinoma

ATCC

+

+

-

Luminal B

Luminal A

UACC-812

F

ductal_carcinoma

ATCC

+

-

+

Her2amp

Luminal B

UACC-893

F

ductal_carcinoma

ATCC

-

-

+

Her2amp

Her2amp

YMB-1

F

 

HSRRB

+

-

-

Luminal B

Luminal A

ZR-75-1

F

ductal_carcinoma

ATCC

   

Luminal A

Her2amp

ZR-75-30

F

ductal_carcinoma

ATCC

+

+

-

Her2amp

Luminal A

HCC2185

   

-

-

-

NON

Basal-like

HMEL

      

NON

Basal-like

HCC3153

   

-

-

-

NON

Basal-like

ZR75B

   

+

-

-

NON

Luminal A

600MPE

   

+

-

-

NON

Luminal A

SUM1315MO2

   

-

-

 

NON

Basal-like

SUM149PT

   

-

-

-

NON

Basal-like

SUM159PT

   

-

-

-

NON

Basal-like

SUM225CWN

   

-

-

+

NON

Her2amp

LY2

   

+

-

-

NON

Luminal A