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Table 1 Comparison of the SMRT and HiSeq assemblies of isolate 2516. The statistics for the SMRT assembly were extracted from the final version of the assembly: four core chromosomes and 172 supernumerary contigs

From: Living apart together: crosstalk between the core and supernumerary genomes in a fungal plant pathogen

 

SMRT assembly

HiSeq assembly

Number of contigs

176

1253

Average coverage

20.2

111.5

Total sequence length (bp)

46309701

39020932

Average sequence length (bp)

263123

31142

Minimum sequence length (bp)

10816

1004

Maximum sequence length (bp)

11790407

701709

N50 sequence index (# of contigs)

2

62

N50 sequence length (bp)

8783590

170721