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Fig. 4 | BMC Genomics

Fig. 4

From: The transcriptional and splicing landscape of intestinal organoids undergoing nutrient starvation or endoplasmic reticulum stress

Fig. 4

Metabolic stress affects the expression profile of intestinal stem cell genes. a Scatterplot analysis of the fold expression profiles of 151 intestinal stem cell (ISC) genes upon thapsigargin and nutrient starvation. b Overall fold induction of ISC genes compared to the total gene induction upon thapsigargin treatment and nutrient starvation. c List of ISC genes upregulated and downregulation more than 2 fold upon stress. d Cell proliferation was analyzed by flow cytometry by monitoring EdU incorporation during the last 2 h of the 4 h treatment. Representative profiles of thapsigargin-treated (blue), nutrient-starved (green) and untreated control organoids (black) are shown. e Quantification of cell proliferation is presented as mean fluorescence intensity (MFI)

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