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Table 1 Summary of whole-genome sequencing and RAD-seq data from BMK and BGI with averages in brackets

From: De novo SNP discovery and genetic linkage mapping in poplar using restriction site associated DNA and whole-genome sequencing technologies

Experiment

Sample

Number of sample

Number of clean reads

Clean reads data (Gb)

Number of high-quality reads

High-quality reads data (Gb)

BMK

Female parent

1

288,115,744

29.10

231,587,056

23.39

 

Male parent

1

326,922,690

33.02

258,870,468

26.15

BGI

Progeny

150

2,010,564,342

(13,403,762)

137.37

(0.92)

1,950,292,874

(13,001,952)

123.23

(0.82)

Total

Total

152

2,625,602,776

199.49

2,440,750,398

172.77

  1. RAD-seq restriction site associated DNA sequencing