Table 6 Type I errors of SKAT-O and AP-SKAT to evaluate the inflation of p-values using 1000 Genomes Project data under the noises according to the Student’s t -distribution with 5 degrees of freedom
From: AP-SKAT: highly-efficient genome-wide rare variant association test
Sample Size | 500 | 1000 | 1500 | 2000 |
|---|---|---|---|---|
SKAT-O | 356 | 178 | 202 | 142 |
AP-SKAT | 348 | 153 | 189 | 130 |