Comparative genomics of Clostridium bolteae and Clostridium clostridioforme reveals species-specific genomic properties and numerous putative antibiotic resistance determinants

Table 1 Sequencing statistics and genome information

	Strain name	Year of isolation	Origin	CIP	Average sequencing coverage (times)	No. of contigs	Genome size (kb)	Predicted no. of genes (Broad Institute)	Predicted no. of proteins (Broad Institute)	No. of strain-specific CDSs (singletons & paralogs)	No. of strain-specific CDSs (unique)
C. bolteae	90A5	2009	perineal abcess	110254	176	12	6394	5833	5716	84	73
C. bolteae	90A7	2009	intraabdominal fluid	110239	185	8	6159	5719	5592	743	735
C. bolteae	90A9	2009	douglas abcess	110242	134	1	6367	5833	5731	163	161
C. bolteae	90B3	2009	pelvis abcess	110247	176	4	6480	6059	5949	239	188
C. bolteae	90B7	2010	pleural abcess	110255	165	19	6398	5876	5761	120	105
C. bolteae	90B8	2010	ureteral abcess	110256	76	21	6449	6023	5901	905	846
C. clostridioforme	90A1	2009	intraabdominal fluid	110245	145	16	5769	5669	5546	130	72
C. clostridioforme	90A3	2009	sigmoid abcess	110246	135	11	5467	5231	5096	31	21
C. clostridioforme	90A4	2009	bone biopsy	110238	264	48	5820	5726	5547	97	72
C. clostridioforme	90A6	2009	intraabdominal fluid	110240	167	22	5970	5851	5711	307	273
C. clostridioforme	90A8	2009	intraabdominal fluid	110249	82	47	5927	5916	5734	1190	1006
C. clostridioforme	90B1	2009	rectal abcess	110244	174	10	5533	5308	5184	48	36

ISSN: 1471-2164