CEGMA alignment | ||||||||||
Assembly | Count | # CEGs Protein | Complete CEGs count | % Completeness | Partial CEGS | % Partials | Missing CEGs | % Missing | Total CEGs | % Complete and partial CEGs |
PacBio isoforms | 107,598 | 248 | 240 | 96.77 | 3 | 1.2 | 5 | 2.02 | 243 | 97.98 |
de novo contigs | 906,566 | 248 | 242 | 97.58 | 6 | 2.4 | 0 | 0.00 | 248 | 100.00 |
Unigenes | 72,269 | 248 | 224 | 90.32 | 13 | 5.2 | 11 | 4.44 | 237 | 95.56 |
SoGI dataset | 121,342 | 248 | 156 | 62.90 | 61 | 24.6 | 31 | 12.50 | 217 | 87.50 |
BUSCO notation alignment | ||||||||||
Assembly | Total complete (%) | Single copy BUSCOs (%) | Duplicated BUSCOs (%) | Fragmented BUSCOs (%) | Missing BUSCOs (%) | Complete and fragmented (%) | ||||
PacBio transcript isoforms | 83.58 | 17.15 | 66.42 | 6.69 | 9.73 | 90.27 | ||||
de novo transcript contigs | 92.99 | 10.04 | 82.95 | 4.71 | 2.30 | 97.70 | ||||
Unigenes | 79.60 | 63.81 | 15.79 | 11.40 | 9.00 | 91.00 | ||||
SoGI | 46.65 | 26.67 | 19.98 | 34.41 | 18.93 | 81.07 |