Locus / gene in V. parahemolyticus CHN25 | Description of encoded protein | Fold change | |
---|---|---|---|
RNA-Seq | RT-PCR | ||
ΔVpacspA mutant | |||
VpaChn25A_0188 | Hypothetical protein | 13.41 | 10.21 |
VpaChn25_1642 | Tricarboxylic transport TctC | 10.04 | 10.35 |
VpaChn25_1640 | GntR family transcriptional regulator | 4.24 | 2.49 |
VpaChn25A_0561 | Aldehyde dehydrogenase | 7.05 | 5.24 |
VpaChn25_0068 | Hyperosmotically inducible periplasmic protein | 3.03 | 2.33 |
VpaChn25A_1398 | L-threonine 3-dehydrogenase | 0.07 | 0.03 |
VpaChn25A_1399 | 2-amino-3-ketobutyrate CoA ligase | 0.07 | 0.03 |
VpaChn25_2988 | Amino acid ABC transporter substrate-binding protein | 0.14 | 0.09 |
VpaChn25A_0149 | Transcriptional regulator CpxR | 0.22 | 0.12 |
VpaChn25A_0568 | Transcriptional regulator BetI | 0.48 | 0.32 |
ΔVpacspD mutant | |||
VpaChn25_1716 | Glycine betaine transporter periplasmic subunit | 16.04 | 19.13 |
VpaChn25A_0188 | Hypothetical protein | 12.6 | 11.11 |
VpaChn25_1642 | Tricarboxylic transport TctC | 7.95 | 7.13 |
VpaChn25A_0561 | Aldehyde dehydrogenase | 4.08 | 3.23 |
VpaChn25_1640 | GntR family transcriptional regulator | 2.29 | 2.62 |
VpaChn25_2248 | Glycerol uptake facilitator protein GlpF | 0.04 | 0.02 |
VpaChn25A_1398 | L-threonine 3-dehydrogenase | 0.05 | 0.03 |
VpaChn25A_1399 | 2-amino-3-ketobutyrate CoA ligase | 0.048 | 0.021 |
VpaChn25_2988 | Amino acid ABC transporter substrate-binding protein | 0.2 | 0.14 |
VpaChn25A_0149 | Transcriptional regulator CpxR | 0.3 | 0.25 |
ΔVpacspAD mutant | |||
VpaChn25A_1312 | PTS system fructose-specific transporter subunit IIABC | 8.77 | 21.54 |
VpaChn25A_0303 | PTS system fructose-specific transporter subunit IIA | 8.07 | 19.04 |
VpaChn25A_1313 | Mannose-6-phosphate isomerase | 5.17 | 16.82 |
VpaChn25_0669 | Trehalose-6-phosphate hydrolase | 4.51 | 9.77 |
VpaChn25A_0561 | Aldehyde dehydrogenase | 2.97 | 4.1 |
VpaChn25_2248 | Glycerol uptake facilitator protein GlpF | 0.033 | 0.039 |
VpaChn25_2249 | Glycerol kinase | 0.04 | 0.07 |
VpaChn25_0112 | Phosphoenolpyruvate carboxykinase | 0.17 | 0.22 |
VpaChn25_2988 | Amino acid ABC transporter substrate-binding protein | 0.31 | 0.43 |
VpaChn25A_0149 | Transcriptional regulator CpxR | 0.42 | 0.46 |