Table 1 Genes upregulated in response to PA23 treatment. B. napus identifiers used as per the Genome Genoscope Database (www.genoscope.cns.fr/brassicanapus). TAIR identifiers used as per The Arabidopsis Information Resource (TAIR, https://www.arabidopsis.org). Fold change in PA23 compared to the water control
B. napus identifier | TAIR identifier | Gene name/function | Fold change |
|---|---|---|---|
BnaC03g29580D | AT4G12490.1 | EARLI1-like lipid transfer protein 2 | 53.07 |
BnaA09g20900D | AT4G12490.1 | EARLI1-like lipid transfer protein 2 | 40.22 |
BnaC07g14090D | AT1G22070.1 | TGA3 (Transcriptional activator) | 35.95 |
BnaC06g37650D | AT1G21310.1 | EXT3 (Extensin 3) | 32.56 |
BnaC06g18380D | - | F-box/LRR-repeat protein 4-like | 30.61 |
BnaC02g31910D | AT5G45890.1 | SAG12 (Senescence-specific cysteine protease) | 18.37 |
BnaC09g26890D | - | Possible nucleotide phosphorylase | 17.43 |
BnaC08g46150D | - | Possible malonate decarboxylase | 16.69 |
BnaC06g14700D | - | Photosystem II reaction center protein A | 16.66 |
BnaA02g24130D | AT5G45890.1 | SAG12 (Senescence-specific cysteine protease) | 15.15 |
BnaC05g10350D | AT1G14080.1 | FUT6 (Fucosyltransferase 6) | 14.99 |
BnaCnng12890D | ATMG00640.1 | ATP4 (ATP synthase subunit 4) | 14.18 |
BnaA10g18480D | AT5G15800.1 | SEP1 (SEPALLATA 1 transcription factor) | 12.56 |
BnaCnng13130D | ATMG00900.1 | CcmC (Cytochrome c assembly protein) | 12.04 |
BnaC04g28910D | AT5G24150.1 | Squalene monooxygenase 1-like | 11.94 |
BnaAnng01030D | AT5G04740.1 | ACR12 (ACT-domain containing protein) | 11.88 |
BnaCnng24320D | AT3G09190.1 | Concanavalin A-like lectin family protein | 11.87 |
BnaA01g34180D | ATCG00130.1 | AtpF (ATP synthase subunit b, chloroplastic) | 11.79 |
BnaC09g29230D | - | Possible omega-6 fatty acid desaturase | 11.24 |
BnaAnng35860D | AT3G28700.1 | NADH dehydrogenase [ubiquinone] complex I, assembly factor 7-like | 9.93 |
BnaA01g34980D | AT4G19810.1 | ChiC (Class V chitinase) | 9.74 |
BnaCnng12960D | ATMG00070.1 | NAD9 (NADH dehydrogenase subunit 9) | 9.64 |
BnaA01g33070D | AT3G02310.1 | SEP2 (SEPALLATA 2 transcription factor) | 9.39 |
BnaC05g38940D | AT3G14610.1 | Cytochrome P450 | 8.93 |
BnaA03g38630D | AT2G14580.1 | Basic PR-1 | 8.63 |
BnaC09g27530D | ATCG00340.1 | PsaB (Photosystem I) | 8.58 |
BnaC04g20930D | AT3G30390.2 | Probable amino acid transporter | 8.47 |
BnaA07g37560D | AT5G38100.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 8.02 |
BnaUnng03950D | ATMG01170.1 | ATPase subunit 6 | 7.90 |
BnaC04g21290D | ATMG01360.1 | COX1 (cytochrome c oxidase subunit 1) | 7.87 |
BnaC09g32980D | AT5G57220.1 | Cytochrome P450, family 81, subfamily F, polypeptide 2 | 7.77 |
BnaA08g22890D | AT1G17860.1 | Kunitz family trypsin and protease inhibitor protein | 7.73 |
BnaA07g21130D | - | Extensin-like protein | 7.63 |
BnaA01g37280D | AT4G11600.1 | GPX6 (Glutathione peroxidase, mitochondrial) | 7.49 |