Skip to main content

Table 2 Primers used in this study

From: Plant jasmonate ZIM domain genes: shedding light on structure and expression patterns of JAZ gene family in sugarcane

primer

Forward primer (5′-3′)

Reverse primer (5′-3′)

Strategy

ScJAZ1-Q

CCTGTTACTACCACTACTAC

ACAAGGCTTTAGATAGAGTT

qRT-PCR analysis

ScJAZ2-Q

CTGAAGAAGGTGAACTCA

ATCTGACTACTAAGCAACA

qRT-PCR analysis

ScJAZ3-Q

TTTAATTCGGTGGTTTCC

AATACATCTCTACAGTCTCT

qRT-PCR analysis

ScJAZ4-Q

CTTCTACGGCGGCAAGAT

CTTGAGCGACACCTTCCT

qRT-PCR analysis

ScJAZ5-Q

CGCTCTGATTCCTGTTCG

GTCTCTTCCTATAATCCTCTTCCT

qRT-PCR analysis

ScJAZ6-Q

GCTGTTCCTCCCGTAAGT

GTTGTCACCCTTTCCTTTCTTT

qRT-PCR analysis

ScJAZ7-Q

CGATTAGCAGTGATTTCAT

ACATCTCTACAGTCCTCT

qRT-PCR analysis

ScJAZ6-cDNA

GGACGAGAAGGTGCTGA

GGCGCTAGGGCAAA

Gene cloning

ScJAZ6-Subloc

TGCTCTAGAATGGAGAGGGACTTCCTG

CGGGATCCGATCTGTAGTTTCGTACT

Subcellular localization assay

ScJAZ6-32a

CGGGATCCATGGAGAGGGACTTCC

CCCAAGCTTTCAGATCTGTAGTTTCGTACTG

Prokaryotic expression

ScJAZ6–1301

TGCTCTAGAATGGAGAGGGACTTCCTG

CGGGATCCTCAGATCTGTAGTTTCGTACT

Transient overexpression

GAPDH

CACGGCCACTGGAAGCA

TCCTCAGGGTTCCTGATGCC

Reference genes

NtHSR201

CAGCAGTCCTTTGGCGTTGTC

GCTCAGTTTAGCCGCAGTTGTG

Transient overexpression

NtHSR203

TGGCTCAACGATTACGCA

GCACGAAACCTGGATGG

Transient overexpression

NtHSR515

TTGGGCAGAATAGATGGGTA

TTTGGTGAAAGTCTTGGCTC

Transient overexpression

NtNPR1

GGCGAGGAGTCCGTTCTTTAA

TCAACCAGGAATGCCACAGC

Transient overexpression

NtPR-1a/c

AACCTTTGACCTGGGACGAC

GCACATCCAACACGAACCGA

Transient overexpression

NtPR2

TGATGCCCTTTTGGATTCTATG

AGTTCCTGCCCCGCTTT

Transient overexpression

NtPR3

CAGGAGGGTATTGCTTTGTTAGG

CGTGGGAAGATGGCTTGTTGTC

Transient overexpression

NtEFE26

CGGACGCTGGTGGCATAAT

CAACAAGAGCTGGTGCTGGATA

Transient overexpression

NtAccdeaminase

TCTGAGGTTACTGATTTGGATTGG

TGGACATGGTGGATAGTTGCT

Transient overexpression

NtEF1-α

TGCTGCTGTAACAAGATGGATGC

GAGATGGGGACAAAGGGGATT

Transient overexpression