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Fig. 5 | BMC Genomics

Fig. 5

From: Lifestyle, gene gain and loss, and transcriptional remodeling cause divergence in the transcriptomes of Phytophthora infestans and Pythium ultimum during potato tuber colonization

Fig. 5

Structure and expression of NPP (NLP) family. The left side of the figure is a cladogram of the genes from Ph. infestans (PITG prefix, black lettering) and Py. ultimum (PU prefix, green lettering). Bootstrap numbers from PhyML are shown at nodes. The right side of the figure indicates the CPM values in early media (average of early rye and pea, green), early tubers (blue) and late tubers (red bars). An absence of bars indicates CPM ≤1.0. Proteins predicted to be secreted are marked by black circle on the terminal branches of the tree, and those bearing the residues required for plant necrosis are marked by a diamond. These correspond to amino acids D112, H120, D123, and E125 of Phytophthora capsici NLP1 [36]. While PITG_22668 contains those residues, it also contains a S113E substitution which was associated with low necrosis in Ph. capsici

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BMC Genomics

ISSN: 1471-2164

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