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Table 2 Summary statistics on functional annotation and metabolic pathway mapping for differentially expressed transcript IDs

From: The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

Details

U14

D14

D30

U30

Total

Differentially expressed transcripts @ FDR 0.01 cut-off

EDGE statistics

451

17,319

16,252

356

34,378

GAUSS statistics

483

24,050

9980

224

34,737

Common to both EDGE and GAUSS

319

16,237

9740

181

26,477

Mapped and annotated

191

12,792

6513

75

19,571

Transcript IDs mapped to various metabolic pathways after curation

52

2791

1121

11

3975

  1. U14: transcripts expressed uniquely at 14dpa (days-post-anthesis); D14: transcripts differentially upregulated at 14dpa; D30: transcripts differentially upregulated at 30dpa; U30: transcripts expressed uniquely at 30dpa; EDGE: count based statistics; GAUSS: mean based statistics