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Table 5 Summary of probes used for gene and transcript based custom CDFs

From: Framework for reanalysis of publicly available Affymetrix® GeneChip® data sets based on functional regions of interest

 

Homo sapiens

Rattus norvegicus

Mus musculus

Gene

Transcript

Gene

Transcript

Gene

Transcript

Number of Probes Used

414,701

504,419

162,356

205,671

323,917

395,884

Number of Probe Sets Constructed

22,651

26,096

13,150

14,466

19,282

20,980

Average Number of Probes Per Probe Set

18

18

12

14

16

18