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Table 6 Summary of probes used for region based custom CDFs

From: Framework for reanalysis of publicly available Affymetrix® GeneChip® data sets based on functional regions of interest

 

Homo sapiens

Rattus norvegicus

Mus musculus

Number of Probes Aligned to Genome

822,681

321,905

637,942

Number of Probes Used

414,701

162,356

323,917

Number of Probe Sets Constructed

33,916

19,839

28,963

Average Number of Probes Per Probe Set

12

8

11