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Table 4 The information of three significant SNP markers associated with four mineral compounds among the 292 spinach accessions using six statistical models, SMR_Qgene, SMR_tassel, GLM_tassel, MLM_tassel, CMLM_gapit, and EcMLM_gapit. Co, Mn, S, and Zn based on T-tesing at P = 0.05

From: Genetic diversity and association mapping of mineral element concentrations in spinach leaves

Trait

 

LOD value (−LOG(p))

R-squre (%)

MAF

 

Qgene

Tassel

GAPIT

Qgene

Tassel

Marker

SMR

SMR

GLM

MLM

cMLM

EcMLM

SMR

SMR

GLM

MLM

Co

AYZV02017730_40

3.74

3.83

2.35

1.98

2.26

1.55

7.00

6.12

3.16

2.78

7.17

Mn

AYZV02017730_40

2.06

2.65

2.10

1.15

0.99

0.66

3.20

3.28

2.46

1.17

6.53

S

AYZV02017730_40

3.25

3.95

3.09

2.42

2.22

1.47

5.00

5.17

3.83

3.01

6.53

Zn

AYZV02017730_40

3.35

3.93

2.63

2.04

1.80

1.19

5.10

5.15

2.98

2.51

6.53

Co

AYZV02094133_57

2.07

2.53

1.46

1.27

1.08

0.65

3.90

4.18

1.93

1.78

16.67

Mn

AYZV02094133_57

4.04

4.50

3.49

2.16

0.33

0.63

6.20

6.56

4.88

2.98

16.32

S

AYZV02094133_57

5.36

6.48

6.15

4.96

3.06

2.46

8.10

9.70

8.95

7.87

16.32

Zn

AYZV02094133_57

1.62

2.30

1.99

1.13

0.49

0.17

2.50

3.04

2.35

1.28

16.32

Co

AYZV02281036_185

2.29

1.54

1.12

1.06

2.37

1.41

4.30

3.17

2.12

2.23

9.07

Mn

AYZV02281036_185

3.12

3.45

3.01

2.88

2.97

1.95

4.80

5.69

4.95

5.14

8.59

S

AYZV02281036_185

2.35

2.00

1.70

1.75

1.71

1.35

3.60

3.34

2.78

3.03

8.59

Zn

AYZV02281036_185

2.86

2.85

2.60

2.47

3.19

2.76

4.40

4.73

3.97

4.22

8.59