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Table 3 Sequence alignment information and support values for key nodes under different alignment strategies

From: Comparative analyses of plastid genomes from fourteen Cornales species: inferences for phylogenetic relationships and genome evolution

Data set

Blocks

Number of sites

Variable sites

Parsimony informative sites

Support value (LB/PP)

(Cornaceae-Alangiaceae)-Curtisiaceae

(Mastixiaceae-Davidiaceae-Nyssaceae) - Hydrangeaceae

Coding

Unfiltered

75,334

13,147(17.5%)

8336(11.1%)

81/1.0

99/1.0

Light filtered

74,352

13,040(17.5%)

8305(11.2%)

82/1.0

100/1.0

Strict filtered

72,369

12,267(17.0%)

7809(10.8%)

78/1.0

100/1.0

Noncoding

Unfiltered

72,056

24,406(33.9%)

14,643(20.3%)

99/1.0

100/1.0

Light filtered

51,343

18,974(37.0%)

12,232(23.8%)

99/1.0

100/1.0

Strict filtered

32,852

10,167(30.9%)

6545(19.9%)

100/1.0

100/1.0

Complete

Unfiltered

148,838

37,928(25.5%)

23,136(15.5%)

100/1.0

100/1.0

Light filtered

126,591

32,266(25.5%)

20,678(16.3%)

99/1.0

100/1.0

Strict filtered

106,325

22,745(21.4%)

14,551(13.7%)

100/1.0

100/1.0