Table 1 Core- and pan-genome of the genus Lactobacillus and of 5 Lactobacillus spec
Genus | Species | N genomes | Genome size (Mbp) | NGenes | core | softcore | shell | cloud | pan |
|---|---|---|---|---|---|---|---|---|---|
Lactobacillus | – | 98 | 2.47 ± 0.55 | 2274 ± 528 | 266 | 594 | 7249 | 12,957 | 20,800 |
Lactobacillus | helveticus | 19 | 2.02 ± 0.13 | 2050 ± 164 | 908 | 1062 | 1133 | 1155 | 3350 |
Lactobacillus | reuteri | 25 | 2.10 ± 0.12 | 2050 ± 117 | 897 | 1306 | 1364 | 1290 | 3960 |
Lactobacillus | rhamnosus | 51 | 2.97 ± 0.08 | 2788 ± 71 | 811 | 1920 | 1736 | 1233 | 4889 |
Lactobacillus | plantarum | 122 | 3.27 ± 0.13 | 3075 ± 140 | 1037 | 2144 | 2826 | 2640 | 7610 |
Lactobacillus | delbrueckii | 29 | 1.88 ± 0.13 | 1873 ± 93 | 756 | 1042 | 1336 | 1082 | 3460 |