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Fig. 9 | BMC Genomics

Fig. 9

From: Identification of novel MITEs (miniature inverted-repeat transposable elements) in Coxiella burnetii: implications for protein and small RNA evolution

Fig. 9

Locations of QMITE1 and QMITE2 insertions in the C. burnetii Dugway 5 J108-111 genome. The outer ring depicts the RSA 493 chromosome in 100,000 bp increments. The next ring depicts locations of forward strand ORFs in green, IS1111 locations in blue, and non-IS1111 TEs in black, followed by reverse strand ORFs in red on the next ring also featuring IS1111 in blue and non-IS1111 TEs in black. The next ring depicts all chromosomal QMITE1 locations. Green ticks indicate QMITE1 insertions oriented in the forward, while red ticks indicate QMITE1 insertions in the reverse orientation. The next ring depicts QMITE2 insertions, with green ticks indicating forward insertions, red ticks indicating reverse insertions, and blue ticks indicating IS1111-associated QMITE2 inserts. The following ring labels all of the locus tags for ORFs that have some overlap with either QMITE1 or QMITE2 insertions. ORFs labeled in blue are those that are encoded by QMITE1 insertions and represent the DUF1658 family of proteins. Colored links are omitted because the DUF1658 protein products remain the same between strains and largely depend on how the genome was annotated

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