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Table 1 Summary of H. parviporum isolates, mapping and variants relative to the reference isolate S15

From: Intraspecific comparative genomics of isolates of the Norway spruce pathogen (Heterobasidion parviporum) and identification of its potential virulence factors

Isolate

Namea

Origins

HAMBI/FBCC number

Mapped reads

Reads depth (x)

Reads coverage (%)

SNPs

InDels

03020

S1

Pernaja, Horslök

2362

20,338,386

47.76

93.52

146,387

34,661

04121

S2

Artjärvi

2365

20,914,722

49.13

92.97

140,039

34,113

93242

S3

Siilinjärvi

2366

21,352,488

50.13

93.80

138,032

34,749

04051

S4

Mäntsälä

2368

19,057,716

44.78

93.48

136,927

33,259

99055

S5

Kolari, Ylläs

2361

18,024,412

42.34

93.60

144,819

34,027

91271

S6

Karkkila

2363

20,342,018

47.78

95.21

94,638

29,362

99058

S7

Kittilä, Kukasjärvi

2354

20,662,349

48.54

92.44

141,327

32,800

01039

S8

Hattula, Korkee

2369

18,110,965

42.55

93.48

150,875

34,805

96160

S9

Askola

2355

19,847,739

46.58

93.07

135,994

32,959

05029

S10

Kirkkonummi, Yövilä

2364

19,240,310

45.20

93.86

143,212

33,761

99067

S11

Loppi, Launonen

2360

21,492,624

50.51

93.13

143,010

34,019

94174

S12

Loimaa, Köyliön kylä

2358

17,832,237

41.90

92.72

140,559

32,891

98038

S13

Suomusjärvi, Kettula

2370

21,039,687

49.36

93.06

153,255

35,875

03014

S14

Kuhmoinen

2367

19,767,540

46.42

92.79

143,762

33,717

96026

S15

Ã…land Islands

2359

–

–

–

–

–

  1. aReferred name in this study