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Table 4 Secreted protein located within outlier window with negative Tajima’s D value (D < −1.9365)

From: Intraspecific comparative genomics of isolates of the Norway spruce pathogen (Heterobasidion parviporum) and identification of its potential virulence factors

Gene ID

Brief description

InterPro accession

InterPro name

PHI-hita

evm.scaffold1.1114

CE8

IPR000070;

IPR011050

Pectinesterase, catalytic;

Pectin lyase fold/virulence factor

evm.scaffold13.112

CBM1

IPR000254

Cellulose-binding domain, fungal

Yesb

evm.scaffold35.37

CBM50

IPR018392

2 LysM domains

 

evm.scaffold67.10

Laccase

IPR001117;

IPR011706;

IPR011707;

IPR008972;

Multicopper oxidase, type 1;

Multicopper oxidase, type 2;

Multicopper oxidase, type 3;

Cupredoxin

Yes

evm.scaffold7.263

AA9

IPR005103

Glycoside hydrolase, family 61

Yesb

evm.scaffold15.16

GH10

IPR001000

Glycoside hydrolase family 10 domain;

Yesb

evm.scaffold8.166

GH76

IPR005198;

IPR008928

Glycoside hydrolase, family 76;

Six-hairpin glycosidase-like

evm.scaffold7.23

GH92

IPR012939;

IPR014718;

IPR008928

Glycosyl hydrolase family 92;

Glycoside hydrolase-type carbohydrate-binding;

Six-hairpin glycosidase-like

evm.scaffold38.42

GH92

IPR012939;

IPR014718;

IPR008928

Glycosyl hydrolase family 92;

Glycoside hydrolase-type carbohydrate-binding;

Six-hairpin glycosidase-like

evm.scaffold2.822

Thioredoxin protein disulfide isomerase (TrxM)

IPR013766

Thioredoxin domain

Yes

evm.scaffold7.192

Chloroperoxidase (HalPrx)

IPR000028

Chloroperoxidase

Yes

evm.scaffold20.57

Phosphatidylethanolamine binding protein (I51)

IPR008914

Phosphatidylethanolamine-binding protein

evm.scaffold5.277

Subtilisin-like protease (S08A)

IPR015500;

IPR000209;

IPR003137;

IPR010435

Peptidase S8, subtilisin-related;

Peptidase S8/S53 domain;

PA domain;

Fn3-like domain

evm.scaffold53.38

S53 protease (S53)

IPR015366;

IPR030400

Peptidase S53, activation domain;

Sedolisin domain

evm.scaffold53.39

S53 protease (S53)

IPR015366;

IPR030400

Peptidase S53, activation domain;

Sedolisin domain

evm.scaffold16.111

Cytochrome P450

IPR002401

Cytochrome P450, E-class, group I

Yes

evm.scaffold7.193

Phenol 2-monooxygenase

IPR023753;

IPR012941;

FAD/NAD(P)-binding domain;

Phenol hydroxylase, C-terminal dimerisation domain

evm.scaffold10.132

Putative hydrophobic surface-binding protein

IPR021054

Cell wall mannoprotein 1

evm.scaffold11.199

Hypothetical protein

IPR006689;

IPR005225;

IPR027417

Small GTPase superfamily, ARF/SAR type;

Small GTP-binding protein domain;

P-loop containing nucleoside triphosphate hydrolase

Yes

evm.scaffold14.153

Hypothetical protein

IPR008030;

IPR016040

NmrA-like domain;

NAD(P)-binding domain

 

evm.scaffold27.89

Hypothetical protein

evm.scaffold2.412

Hypothetical protein

IPR000994

Peptidase M24

evm.scaffold38.41

Hypothetical protein

IPR001623;

IPR011990;

IPR019734

DnaJ domain;

Tetratricopeptide-like helical domain;

Tetratricopeptide repeat

Yes

evm.scaffold4.300

Hypothetical protein

evm.scaffold57.22

Hypothetical protein

IPR017905

ERV/ALR sulfhydryl oxidase domain

evm.scaffold58.12

evm.scaffold58.13

Fasciclin-like protein

IPR008972

Cupredoxin

  1. a“Yes” signifies the proteins having hits in PHI-base database and “b” means the hits were annotated as effectors