Table 1 Main CAZymes related to biomass deconstruction upregulated in A. fumigatus AF293 transcriptome
From: Transcriptome and secretome analysis of Aspergillus fumigatus in the presence of sugarcane bagasse
Gene ID | Gene Description | CAZy family | log2FC | Peptide Signal | Predicted substrate |
|---|---|---|---|---|---|
Afu3g03870 | endo-1,4-beta-glucanase | AA9 | 9.21 | Y | cellulose |
Afu4g07850 | endoglucanase | AA9 | 8.75 | Y | cellulose |
Afu2g00920 | extracellular glycosyl hydrolase/cellulase | CBM1 | 9.35 | Y | arabinoxylan |
Afu3g00420 | acetyl xylan esterase (Axe1) | CBM1 | 4.13 | Y | xylan |
Afu6g01800 | endoglucanase | CBM1 | 9.57 | Y | cellulose |
Afu6g03280 | swollenin | CBM1 | 7.51 | Y | cellulose |
Afu6g11600 | endoglucanase | CBM1 | 8.11 | Y | cellulose |
Afu6g13610 | endo-1,4-beta-xylanase | CBM1 | 9.20 | Y | xylan |
Afu7g06740 | endoglucanase | CBM1 | 8.34 | N | cellulose |
Afu8g06570 | acetyl xylan esterase | CBM1 | 7.57 | Y | xylan |
Afu8g06830 | endoglucanase | CBM1 | 4.40 | Y | cellulose, β-1,4-glucan |
Afu2g00690 | glucan 1,4-alpha-glucosidase | CBM20 | 2.94 | Y | starch |
Afu4g10140 | glucoamylase | CBM20 | 1.14 | N | starch |
Afu8g02510 | glycosyl hydrolase family 43 protein | CBM35 | 1.61 | Y | xylan, pectin |
Afu2g14530 | esterase | CE1 | 2.16 | Y | xylan |
Afu7g02380 | ferulic acid esterase (FaeA) | CE1 | 1.72 | Y | xylan |
Afu2g00510 | cellulose-binding GDSL lipase/acylhydrolase | CE16 | 7.28 | Y | xylan, mannan |
Afu2g00630 | cellulose-binding GDSL lipase/acylhydrolase | CE16 | 3.97 | Y | xylan, mannan |
Afu2g09380 | cutinase | CE5 | 7.10 | Y | cutin |
Afu2g14420 | cutinase | CE5 | 3.71 | Y | cutin |
Afu4g03210 | cutinase | CE5 | 6.74 | Y | cutin |
Afu1g14710 | beta-glucosidase | GH1 | 3.42 | N | cellulose |
Afu3g15210 | endo-1,4-beta-xylanase | GH10 | 8.59 | Y | xylan |
Afu4g09480 | extracellular endo-1,4-beta-xylanase | GH10 | 8.82 | Y | xylan |
Afu3g00320 | endo-1,4-beta-xylanase (XlnA) | GH11 | 10.39 | Y | xylan |
Afu3g00470 | endo-1,4-beta-xylanase | GH11 | 8.64 | Y | xylan |
Afu6g12210 | endo-1,4-beta-xylanase (XynG1) | GH11 | 6.91 | Y | xylan |
Afu7g06150 | endoglucanase | GH12 | 8.58 | Y | cellulose |
Afu3g02090 | beta-xylosidase | GH3 | 4.17 | Y | xylan |
Afu4g13770 | glycosyl hydrolase | GH3 | 1.55 | Y | cellulose |
Afu5g07080 | beta-glucosidase | GH3 | 2.03 | Y | cellulose |
Afu5g07190 | beta-glucosidase | GH3 | 2.24 | N | cellulose |
Afu6g14490 | beta-glucosidase | GH3 | 2.58 | N | cellulose |
Afu7g06140 | beta-D-glucoside glucohydrolase | GH3 | 3.03 | Y | cellulose |
Afu8g02100 | beta-glucosidase | GH3 | 2.13 | Y | cellulose |
Afu1g17320 | endo-arabinanase | GH43 | 4.50 | Y | pectin |
Afu2g00930 | xylosidase | GH43 | 7.97 | N | xylan |
Afu2g13190 | xylosidase: arabinofuranosidase | GH43 | 1.99 | N | xylan |
Afu2g14750 | endo-arabinase | GH43 | 1.92 | Y | pectin |
Afu3g01660 | glycosyl hydrolase, family 43 | GH43 | 2.24 | Y | xylan, pectin |
Afu6g00770 | extracellular arabinanase | GH43 | 1.80 | Y | xylan, pectin |
Afu6g14550 | xylosidase/arabinosidase | GH43 | 6.47 | N | xylan, pectin |
Afu8g04710 | xylosidase | GH43 | 4.04 | N | xylan |
Afu5g01830 | extracellular endoglucanase | GH5 | 2.00 | Y | cellulose |
Afu6g07480 | endoglucanase | GH5 | 2.90 | Y | cellulose |
Afu7g01070 | endo-1,4-beta-mannosidase | GH5 | 2.48 | N | mannan |
Afu7g05610 | glucanase | GH5 | 5.07 | N | β-1,6-glucan |
Afu8g07030 | endo-1,4-beta-mannosidase | GH5 | 1.82 | Y | mannan, galactomannan, glucomannan |
Afu3g01910 | cellobiohydrolase | GH6 | 9.02 | Y | cellulose |
Afu2g12770 | alpha-L-arabinofuranosidase | GH62 | 8.54 | Y | arabinoxylan, arabinogalactan |
Afu5g14380 | Alpha-glucuronidase | GH67 | 2.58 | Y | xylan |
Afu6g07070 | cellobiohydrolase celD | GH7 | 6.78 | Y | cellulose |
Afu6g11610 | 1,4-beta-D-glucan-cellobiohydrolyase | GH7 | 9.83 | Y | cellulose |
Afu8g01490 | endoglucanase | GH74 | 7.89 | Y | xyloglucan |
Afu2g12830 | UDP-glucosyl transferase family protein | GT1 | 1.81 | N | UDP-glucosyl + acceptor |
Afu8g02020 | glycosyltransferase | GT2 | 3.09 | N | – |
Afu8g00650 | LPS glycosyltransferase | GT25 | 2.11 | N | UDP-glucose + lypopolysaccharide |
Afu8g00640 | glycosyl transferase | GT32 | 3.46 | N | – |
Afu1g06890 | alpha-1,2-mannosyltransferase (Alg11) | GT4 | 1.01 | N | GDP-mannose + Man3GlcNAc2-PP-dolichol or Man4GlcNAc2-PP-dolichol |
Afu1g17030 | glycosyl transferase | GT4 | 2.05 | N | – |
Afu3g07700 | glucosyltransferase | GT57 | 1.31 | N | dolichol-P-glucose + acceptor |
Afu6g04450 | alpha-1,2-mannosyltransferase (Mnn2) | GT71 | 1.46 | N | GDP-mannose + heteroglycan |
Afu6g14480 | alpha-1,3-mannosyltransferase | GT71 | 1.22 | N | GDP-mannose + heteroglycan |
Afu2g00760 | pectate lyase A | PL1 | 1.10 | Y | pectin |
Afu4g03780 | rhamnogalacturonase B | PL4 | 1.76 | Y | pectin |
Afu8g00820 | rhamnogalacturonase | PL4 | 3.09 | Y | pectin |