Skip to main content

Advertisement

Table 1 Summary of three chloroplast genomes sequenced in this study

From: Chloroplast genome analyses and genomic resource development for epilithic sister genera Oresitrophe and Mukdenia (Saxifragaceae), using genome skimming data

Category O. rupifraga-BJCP O. rupifraga-HNYD Mukdenia rossii
Total cp DNA size (bp) 156,775 156,738 156,960
Length of large single copy (LSC) region (bp) 87,515 87,496 87,604
Length of inverted repeat (IR) region (bp) 25,519 25,509 25,507
Length of small single copy (SSC) region (bp) 18,222 18,224 8342
Coding size (bp) 90,954 90,954 90,954
Intron size (bp) 20,301 20,285 20,290
Spacer size (bp) 45,520 45,499 45,716
Total GC content (%) 37.80 37.80 37.70
GC content of LSC (%) 35.70 35.80 35.70
GC content of IR (%) 43.20 43.20 43.20
GC content of SSC (%) 32.20 32.20 32.00
Total number of genes 113 113 113
Number of protein encoding genes 79 79 79
Number of tRNA genes 30 30 30
Number of rRNA genes 4 4 4
Number of genes duplicated in IR 18 18 18