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Table 1 Summary of three chloroplast genomes sequenced in this study

From: Chloroplast genome analyses and genomic resource development for epilithic sister genera Oresitrophe and Mukdenia (Saxifragaceae), using genome skimming data

Category

O. rupifraga-BJCP

O. rupifraga-HNYD

Mukdenia rossii

Total cp DNA size (bp)

156,775

156,738

156,960

Length of large single copy (LSC) region (bp)

87,515

87,496

87,604

Length of inverted repeat (IR) region (bp)

25,519

25,509

25,507

Length of small single copy (SSC) region (bp)

18,222

18,224

8342

Coding size (bp)

90,954

90,954

90,954

Intron size (bp)

20,301

20,285

20,290

Spacer size (bp)

45,520

45,499

45,716

Total GC content (%)

37.80

37.80

37.70

GC content of LSC (%)

35.70

35.80

35.70

GC content of IR (%)

43.20

43.20

43.20

GC content of SSC (%)

32.20

32.20

32.00

Total number of genes

113

113

113

Number of protein encoding genes

79

79

79

Number of tRNA genes

30

30

30

Number of rRNA genes

4

4

4

Number of genes duplicated in IR

18

18

18